BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C05LP1|AL428516
(893 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1688 1752 0.0
>3x_Contig1688
Length = 18058
Score = 1752 bits (881), Expect = 0.0
Identities = 888/893 (99%)
Strand = Plus / Plus
Query: 1 gatctgacatttgctgtagcacactcttgtctttaattggttctaactgaaattcaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5127 gatctgacatttgctgtagcacactcttgtctttaattggttctaactgaaattcaatta 5186
Query: 61 atttgtagagtaaactacaagcagttttgcacccgttacttgttttcaaaaggggtacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5187 atttgtagagtaaactacaagcagttttgcacccgttacttgttttcaaaaggggtacac 5246
Query: 121 acatcttaaacagtcgtatttcctcttccggactgaatgaatttttgctctgagagcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5247 acatcttaaacagtcgtatttcctcttccggactgaatgaatttttgctctgagagcaca 5306
Query: 181 tcggaatgaaacaactgagacataataacatgaatctaacatcttgggagcaccgaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5307 tcggaatgaaacaactgagacataataacatgaatctaacatcttgggagcaccgaaaca 5366
Query: 241 attcctctttcaaatgagacaactcaatgttactacagtcaaaaattgaaagataaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5367 attcctctttcaaatgagacaactcaatgttactacagtcaaaaattgaaagataaagca 5426
Query: 301 atccaatatgcaaaccggttgtcttgattttgatagaatcactatcaatgcmattacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5427 atccaatatgcaaaccggttgtcttgattttgatagaatcactatcaatgcaattacaaa 5486
Query: 361 ggaaatcgtcgtatgtcaatgaatcctttaacatatgggcgaatgtatcctttacttttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5487 ggaaatcgtcgtatgtcaatgaatcctttaacatatgggcgaatgtatcctttacttttc 5546
Query: 421 ttctcttaamaagtagtgaacctccggctaaagaactctctttatattctaggaattggt 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5547 ttctcttaaaaagtagtgaacctccggctaaagaactctctttatattctaggaattggt 5606
Query: 481 aattagctttcagcatcattgtcagagacagagcataaagccatatatcttctagacaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5607 aattagctttcagcatcattgtcagagacagagcataaagccatatatcttctagacaat 5666
Query: 541 tcttttcattctggcaaatmtcagacaagctataccaattgaattttgaagatgcaggac 600
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5667 tcttttcattctggcaaatatcagaaaagctataccaattgaattttgaagatgcaggac 5726
Query: 601 catctatgaaggtaacacagtctagtgtgaactttgtatgatcgtattgtttcaacgaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5727 catctatgaaggtaacacagtctagtgtgaactttgtatgatcgtattgtttcaacgaat 5786
Query: 661 gaatcaaatagtcttgaagcgcarggagcaatttctctttgttaacatatgactgatcct 720
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5787 gaatcaaatagtcttgaagcgcagggagcaatttctctttgttaacatatgactgatcct 5846
Query: 721 tgtcctcgcctacaattatcggagttttattgtacagcacttctgatatcatcaaattga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5847 tgtcctcgcctacaattatcggagttttattgtacagcacttctgatatcatcaaattga 5906
Query: 781 atctcgcgatctcccctatattattttcattggttaatttaattcttagtagatgcttaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5907 atctcgcgatctcccctatattattttcattggttaatttaattcttagtagatgcttaa 5966
Query: 841 ttgtgtaatagctaagatttatcacgtcctgaaatcttatcagatgtagtctt 893
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5967 ttgtgtaatagctaagatttatcacgtcctgaaatcttatcagatgtagtctt 6019
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7416
Number of Sequences: 1807
Number of extensions: 7416
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 893
length of database: 10,358,551
effective HSP length: 16
effective length of query: 877
effective length of database: 10,329,639
effective search space: 9059093403
effective search space used: 9059093403
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)